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GWAS Report for Seed oil 6
Experimental Details
Number of germplasm analyzed | 279 |
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Number of loci tested | 59845 |
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Publication for This Experiment
Identification of Major Quantitative Trait Loci for Seed Oil Content in Soybeans by Combining Linkage and Genome-Wide Association Mapping
(Cao et al. 2017a)
Front. Plant Sci. 2017, 8(1222):0-0
10.3389/fpls.2017.01222
Controlled vocabulary terms associated with the QTL Family
GWAS QTL
The GWAS QTL can be shown in either the SoyBase CMap Genetic Map Viewer (where it can be compared to the other GWAS and biparental QTL) or in the SoyBase GBrowse Genome Viewer (where it can be compared to the genes in that chromosomal region). When a candidate gene has been identified clicking on the gene name ('Glyma') opens the SoyBase Gene Report page for that gene.
GWAS QTL name | Associated locus | R2 | p-value | Chromosome | Linkage Group |
Seed oil 6-g1 | Gm05_38506373 | 8.8 | 1.58489E-06 | Gm05 | A1 |
Seed oil 6-g2 | Gm05_38473956 | 10.8 | 1.58489E-07 | Gm05 | A1 |
Seed oil 6-g3 | Gm20_31164168 | 12.9 | 0.00000001 | Gm20 | I |
Seed oil 6-g4 | Gm20_606529 | 8.5 | 2.51189E-06 | Gm20 | I |
Click Here to View Full List of GWAS QTL